Molecular visualization software linux

C, powerful molecular editor with vimlike interface. Vmd is a molecular visualization program for displaying, animating, and analyzing large biomolecular systems using 3d graphics and builtin scripting. Genecoder is a comprehensive and customizable molecular biology software package for use in molecular cloning and sequence analysis of dna and protein sequences. Pymol is an opengl molecular graphics system written in python. One of four chains in oxyhemoglobin zooming in to oxyheme from 1hho. An open source office suite that provides a good alternative to commercial office tools on linux, windows and mac os x platforms. Molecular visualization software for looking at macromolecular structure and its relation to. Ballview provides powerful visualization capabilities for proteins, nucleic acids and small molecules. It can be used to view more general molecules, as vmd reads standard protein data bank pdb files and display the contained structure. Pymol is a usersponsored molecular visualization system on an opensource. Furthermore it is also a framework for developing molecular visualization functionality.

Molecular builder editor for windows, linux, and mac os x. Easy to install and all source code and documentation is. Molecular linux molecular biology related programs for linux sorted by categories. Vega was developed to create a bridge between most of the molecular software packages, like biodock, quantacharmm, insight ii, mopac, etc. Software library for cheminformatics, molecular modelling and visualization. Molecular buildereditor for windows, linux, and mac os x. Emboss, emboss is a package of highquality free open source software. Vesta, free, linux, mac os x, windows, crystal structure visualization and computation. Pymol is a usersponsored molecular visualization system on an opensource foundation, maintained and distributed by schrodinger. Jmoljsmol is a molecular viewer for 3d chemical structures that runs in. The smart choice in molecular visualization software. Iqmol is a free opensource molecular editor and visualization package. Build and interact with molecules using a real time dynamic physical modeling simulation. Pymol is a molecular graphics system with an embedded python interpreter designed for realtime visualization and rapid generation of highquality molecular graphics images and animations.

This is a list of software systems that are used for visualizing macromolecules. It offers flexible high quality rendering and a powerful plugin architecture. Pymol molecular visualization system software linuxlinks. Macintosh, linux and windows software downloads for. Vmd is a molecular visualization program for displaying, animating, and analyzing large biomolecular systems using. Avogadro is an advanced molecule editor and visualizer designed for crossplatform use in computational chemistry, molecular modeling, bioinformatics, materials science, and related areas. Download linux software in the visualization category. Ballview 1 a powerful opensource molecular modeling and visualization tool. Chimera, excellent molecular graphics package with support for a wide range of. Avogadro free crossplatform molecular editor avogadro.

The program runs out of the box on linux, macosx and windows platforms. Free chemistry visualization software survey mario valle. Molecular visualization freeware for proteins, dna and macromolecules. Visualize small molecules, proteins, nucleic acids and periodic structures. Looking for molecular visualization software that is easy enough for students, yet. User interface for creating advanced and customizable scientific graphics. It offers a range of features including a molecular editor, surface generation orbitals and densities and animations vibrational modes and reaction pathways. Chimera interactive molecular modeling system, free to academicnonprofit.